BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030C12LP1|AL429200
(973 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1700 1883 0.0
>3x_Contig1700
Length = 16332
Score = 1883 bits (948), Expect = 0.0
Identities = 968/974 (99%), Gaps = 2/974 (0%)
Strand = Plus / Plus
Query: 1 gatcacgacttcacgttgttttgtgaggnaggtgagtagagtaagtncagtacacgatct 60
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 10406 gatcacgacttcacgttgttttgtgaggaaggtgagtagagtaagtacagtacacgatct 10465
Query: 61 tctaaaacgacaggatcagacacgcgaaaccatactataatacaggacagaaagcgactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10466 tctaaaacgacaggatcagacacgcgaaaccatactataatacaggacagaaagcgactg 10525
Query: 121 gatcggatccaatccaccagtcagagcaataggatatactaaggagatagtaacgagctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10526 gatcggatccaatccaccagtcagagcaataggatatactaaggagatagtaacgagctg 10585
Query: 181 agaaacagcccgttaccctccgtaatgtgcccccttcttcttcccctctacgaccccttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10586 agaaacagcccgttaccctccgtaatgtgcccccttcttcttcccctctacgaccccttc 10645
Query: 241 taggggaaaacgggcccctcccattttttcacagaatttttcgtttctcggtttatttcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10646 taggggaaaacgggcccctcccattttttcacagaatttttcgtttctcggtttatttcc 10705
Query: 301 aggttgaaaagaaaattagcagaacttcgctgagaacaaataaacaataaacaataaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10706 aggttgaaaagaaaattagcagaacttcgctgagaacaaataaacaataaacaataaaga 10765
Query: 361 gcagacaacagacataaacattgaaaatcaacggtgcaggtgctgatacgttattgacgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10766 gcagacaacagacataaacattgaaaatcaacggtgcaggtgctgatacgttattgacgt 10825
Query: 421 ttgttatttgattttacttttgactgttaattgattatttcaggaattaagataccatac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10826 ttgttatttgattttacttttgactgttaattgattatttcaggaattaagataccatac 10885
Query: 481 tgaagtttataccgtgattatcttaccgcgactatgaatctcaataaccaaggacatagc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10886 tgaagtttataccgtgattatcttaccgcgactatgaatctcaataaccaaggacatagc 10945
Query: 541 gaacatcaggatttgatgtattctggcgaacaagaacacgcgcag-aaggacacggcgtg 599
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 10946 gaacatcaggatttgatgtattctggcgaacaagaacacgcgcagcaaggacacggcgtg 11005
Query: 600 cccgtttccatgcaagtgcaatcaccacaatcttaccatatgttgagtggccagcattca 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11006 cccgtttccatgcaagtgcaatcaccacaatcttaccatatgttgagtggccagcattca 11065
Query: 660 gctggccagwgtgaattcaggcaactcgaattcagtccctgcgcaatctggcgttcaatc 719
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11066 gctggccag-gtgaattcaggcaactcgaattcagtccctgcgcaatctggcgttcaatc 11124
Query: 720 ttctcaagctggcgcaggccatccgatggccggtggtaatggcgccggttattcgcagta 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11125 ttctcaagctggcgcaggccatccgatggccggtggtaatggcgccggttattcgcagta 11184
Query: 780 ccaattccataactactttgctcctcagaattcgatgggtggtgtcgcgaattcgtctga 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11185 ccaattccataactactttgctcctcagaattcgatgggtggtgtcgcgaattcgtctga 11244
Query: 840 acagggcgtgtcgtctttaccgctgcagawgcagatgcaaatgcccatgccaggccatca 899
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 11245 acagggcgtgtcgtctttaccgctgcagatgcagatgcaaatgcccatgccaggccatca 11304
Query: 900 ggtttctgacgcgatgttgaaccagatcttggcgcagtttaatcaaagamagcagaatca 959
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 11305 ggtttctgacgcgatgttgaaccagatcttggcgcagtttaatcaaagacagcagaatca 11364
Query: 960 accggggtctcagc 973
||||||||||||||
Sbjct: 11365 accggggtctcagc 11378
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5494
Number of Sequences: 1807
Number of extensions: 5494
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 973
length of database: 10,358,551
effective HSP length: 16
effective length of query: 957
effective length of database: 10,329,639
effective search space: 9885464523
effective search space used: 9885464523
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)